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Organic chemistry flashcards: 50 mechanisms, reactions and rules

SN1, SN2, E1 and E2, stereochemistry, Markovnikov additions, aromatic substitution and carbonyl reactions: the organic chemistry you need for exams, in 50 flashcards.

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General formula of alkynes

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  1. 1
    General formula of alkynes
    CnH2n−2\mathrm{C_nH_{2n-2}}
    Alkynes contain a C≡C triple bond.
  2. 2
    Ether functional group
    An oxygen bonded to two carbon groups: R–O–R′
    Example: diethyl ether.
  3. 3
    Amide functional group
    A carbonyl bonded to nitrogen: R−CO−NR2′\mathrm{R{-}CO{-}NR'_2}
    The simplest form is R−CONH2\mathrm{R{-}CONH_2}.
  4. 4
    Acid chloride (acyl chloride)
    R−COCl\mathrm{R{-}COCl}: a carbonyl bonded to chlorine
  5. 5
    Reactivity of carboxylic acid derivatives (most to least)
    Acid chloride > anhydride > ester > amide
    Toward nucleophilic acyl substitution. Better leaving groups mean more reactive derivatives.
  6. 6
    IUPAC suffixes for alcohols, aldehydes and ketones
    -ol, -al and -one
    Ethanol, ethanal, propanone.
  7. 7
    Which has naming priority in IUPAC: a carboxylic acid or an alcohol?
    The carboxylic acid; the alcohol becomes a “hydroxy-” prefix
  8. 8
    Hybridization and geometry of a carbon with four single bonds
    sp3sp^3, tetrahedral, about 109.5∘109.5^\circ
  9. 9
    Hybridization and geometry of an alkene carbon
    sp2sp^2, trigonal planar, about 120∘120^\circ
  10. 10
    Hybridization and geometry of an alkyne carbon
    spsp, linear, 180∘180^\circ
  11. 11
    Sigma vs pi bonds
    σ: head-on overlap along the bond axis; π: side-by-side overlap of p orbitals
    A double bond is one σ + one π; a triple bond is one σ + two π.
  12. 12
    Resonance structures
    Structures with the same atom positions but different electron placement; the real molecule is a hybrid of them
  13. 13
    Stereoisomers
    Isomers with the same connectivity but a different 3D arrangement
  14. 14
    Enantiomers
    Stereoisomers that are non-superimposable mirror images
  15. 15
    Diastereomers
    Stereoisomers that are not mirror images of each other
  16. 16
    Meso compound
    A compound with stereocenters that is achiral because of an internal mirror plane
    Example: meso-tartaric acid.
  17. 17
    Chiral center (stereocenter)
    Typically a carbon bonded to four different groups
  18. 18
    Maximum number of stereoisomers with nn stereocenters
    2n2^n
    Fewer when meso compounds are possible.
  19. 19
    Cahn–Ingold–Prelog priority rule
    Higher atomic number at the first point of difference gets higher priority
  20. 20
    How do you assign R or S?
    Point the lowest-priority group away; if 1 → 2 → 3 runs clockwise it is R, counterclockwise S
  21. 21
    Racemic mixture
    A 50:50 mixture of two enantiomers; it is optically inactive
  22. 22
    E/Z isomerism in alkenes
    Z: the higher-priority groups are on the same side of the C=C; E: on opposite sides
    It exists because rotation about a C=C bond is restricted.
  23. 23
    SN2 mechanism
    One concerted step with backside attack; rate =k[substrate][Nu]= k[\text{substrate}][\text{Nu}]
    Inverts the configuration at the carbon.
  24. 24
    Best substrates for SN2
    Methyl > primary > secondary; tertiary substrates don’t react by SN2
    Steric hindrance blocks backside attack.
  25. 25
    Solvent that favors SN2
    Polar aprotic, e.g. DMSO, DMF or acetone
  26. 26
    SN1 mechanism
    Two steps through a carbocation; rate =k[substrate]= k[\text{substrate}]
    Gives a mostly racemic product at a stereocenter.
  27. 27
    Conditions that favor SN1
    Tertiary or resonance-stabilized substrates, weak nucleophiles, polar protic solvents
  28. 28
    E2 mechanism
    One concerted step with a strong base; H and the leaving group must be anti-periplanar; rate =k[substrate][base]= k[\text{substrate}][\text{base}]
  29. 29
    E1 mechanism
    Two steps through a carbocation, favored by weak bases and heat; rate =k[substrate]= k[\text{substrate}]
  30. 30
    Zaitsev’s rule
    Eliminations usually give the more substituted, more stable alkene
    Bulky bases such as tert-butoxide favor the less substituted (Hofmann) product.
  31. 31
    Carbocation stability order
    Tertiary > secondary > primary > methyl
    Hyperconjugation and inductive effects; allylic and benzylic cations are also stabilized by resonance.
  32. 32
    Carbocation rearrangement
    A 1,2-hydride or alkyl shift that turns a carbocation into a more stable one
  33. 33
    Product of HBr + propene (no peroxides)
    2-Bromopropane (Markovnikov)
    H adds to the carbon with more hydrogens; Br ends up on the more substituted carbon.
  34. 34
    Product of HBr + propene with peroxides
    1-Bromopropane (anti-Markovnikov)
    A radical mechanism puts Br on the less substituted carbon.
  35. 35
    Hydroboration–oxidation of an alkene
    Anti-Markovnikov alcohol with syn addition (BH3\mathrm{BH_3}; then H2O2\mathrm{H_2O_2}, NaOH\mathrm{NaOH})
    No carbocation, so no rearrangements.
  36. 36
    Acid-catalyzed hydration of an alkene
    Markovnikov alcohol (H2O\mathrm{H_2O}, H2SO4\mathrm{H_2SO_4}), through a carbocation
    Rearrangements are possible.
  37. 37
    What makes an organic acid stronger?
    A more stable conjugate base: negative charge spread by resonance or held by electronegative atoms
  38. 38
    Typical pKa\mathrm{p}K_a of a carboxylic acid, a phenol and an alcohol
    About 4–54\text{–}5, 1010 and 16–1816\text{–}18
  39. 39
    Hückel’s rule
    A cyclic, planar, fully conjugated ring is aromatic with 4n+24n + 2 π electrons
    Benzene has 6 π electrons (n = 1).
  40. 40
    Electrophilic aromatic substitution
    An electrophile replaces a hydrogen on an aromatic ring through a sigma complex (arenium ion), keeping the ring aromatic
  41. 41
    Ortho/para-directing groups
    Activating groups such as −OH\mathrm{-OH}, −NH2\mathrm{-NH_2}, −OCH3\mathrm{-OCH_3} and alkyls, plus the halogens
    Halogens deactivate the ring but still direct ortho/para.
  42. 42
    Meta-directing groups
    Strongly deactivating groups: −NO2\mathrm{-NO_2}, −CN\mathrm{-CN}, −SO3H\mathrm{-SO_3H}, −CF3\mathrm{-CF_3} and carbonyl groups
  43. 43
    Reagents for nitrating benzene
    HNO3\mathrm{HNO_3} with H2SO4\mathrm{H_2SO_4}, which generate the nitronium ion NO2+\mathrm{NO_2^+}
  44. 44
    Nucleophilic addition to a carbonyl
    A nucleophile attacks the electrophilic carbonyl carbon, forming a tetrahedral intermediate
  45. 45
    Grignard reagent + ketone, then aqueous workup
    A tertiary alcohol
    With an aldehyde: a secondary alcohol; with formaldehyde: a primary alcohol.
  46. 46
    NaBH4\mathrm{NaBH_4} vs LiAlH4\mathrm{LiAlH_4}
    Both reduce aldehydes and ketones to alcohols; only LiAlH4\mathrm{LiAlH_4} also reduces esters and carboxylic acids (to primary alcohols)
  47. 47
    PCC oxidation of a primary alcohol
    An aldehyde (PCC stops there)
    Stronger oxidants such as chromic acid or KMnO₄ go on to the carboxylic acid; secondary alcohols give ketones.
  48. 48
    Fischer esterification
    Carboxylic acid + alcohol ⇌\rightleftharpoons ester + water, with an acid catalyst
    It is an equilibrium; excess alcohol or removing water drives it forward.
  49. 49
    Aldol reaction
    An enolate adds to another aldehyde or ketone, giving a β-hydroxy carbonyl compound
    Losing water (aldol condensation) gives an α,β-unsaturated carbonyl.
  50. 50
    Diels–Alder reaction
    A [4+2] cycloaddition of a conjugated diene with a dienophile, forming a cyclohexene ring
    The diene must adopt the s-cis conformation; the reaction is concerted.

Frequently asked questions

What course does this deck cover?

A first-year organic chemistry sequence: structure, stereochemistry, substitution and elimination, alkene additions, aromatic substitution and carbonyl chemistry.

How do I tell SN1 from SN2?

Look at the substrate, nucleophile and solvent: methyl or primary substrates with strong nucleophiles in polar aprotic solvents go SN2; tertiary substrates with weak nucleophiles in polar protic solvents go SN1.

Does it include reaction mechanisms with arrows?

Cards describe mechanisms and outcomes in words and formulas; drawing arrow-pushing mechanisms on paper is a great companion exercise.